Bioinformatician 2

Great Hill Solutions, LLC is part of the Seneca Nation Group (SNG) portfolio of companies. SNG is Seneca Holdings' federal government contracting business that meets mission-critical needs of federal civilian, defense, and intelligence community customers. Our portfolio comprises multiple subsidiaries that participate in the Small Business Administration 8(a) program. To learn more about SNG, visit the website and follow us on LinkedIn.

Our team of talented individuals is what makes us successful. To support our team, we provide a balanced mix of benefits and programs. Your total rewards package includes competitive pay, benefits, and perks, flexible work-life balance, professional development opportunities, and performance and recognition programs. We offer a comprehensive benefits package that includes medical, dental, vision, life, and disability, voluntary benefit programs (critical illness, hospital, and accident), health savings and flexible spending accounts, and retirement 401K plan. One of our fundamental principles is to offer competitive health and welfare benefits to our team members, providing coverage and care for you and your family. Full-time employees working at least 30 hours a week on a regular basis are eligible to participate in our benefits and paid leave programs. We pride ourselves on our collaborative work environment and culture, which embraces our mission of providing financial and non-financial benefits back to the members of the Seneca Nation.

Great Hill Solutions, LLC seeks a highly skilled Bioinformatician II to support the CDC. This role is critical for conducting genomic epidemiologic studies, developing bioinformatics pipelines, and analyzing next-generation sequencing data to support public health surveillance and response efforts.

Duties:

• Develop standard operating procedures and quality documentation for sequence analysis pipelines.
• Provide technical assistance to integrate bioinformatics workflows with existing platforms in CORVD programs.
• Conduct production-level quality control and analysis on next-generation sequencing data produced locally and from outside labs.
• Provide technical assistance on tasks related to genomic epidemiologic studies on the evolution of viruses.
• Apply analytical and interpretive skills to analyze next generation sequence data from global surveillance of viruses.
• Provide data management and analytic support for global surveillance platforms.
• Construct pipelines and workflows for sequence analysis and build custom algorithms and tools for specific problems.
• Conduct genomic epidemiologic studies on the evolution of viruses to detect and assess the risk of new emerging variants to current vaccines.
• Analyze next generation sequence data using spatiotemporal, phylodynamic, and epidemiologic approaches.
• Use mathematical and computational approaches to understand the evolutionary and epidemiological patterns of viruses.
• Ensure appropriate genomic analysis methods, procedures, techniques, and quality controls are correctly conducted.
• Prepare reports, summaries, presentations, papers, and other documents to highlight findings and surveillance data.
• Contribute to abstracts, presentations, and peer-reviewed publications from related projects and studies.

Basic Qualifications:

• BA/BS with 3-10+ years’ experience, MS with 0-7+ years’ experience or PhD with 0-3+ years’ experience.

Desired Qualifications:

• Mastery of at least one general purpose, widely used scripting or programming language (e.g., Python, Perl, Rust).
• Working knowledge of database Structured Query Language (SQL).
• Familiarity with analytics languages or tools such as R or Pandas.
• Familiarity with pipelining tools such as Nextflow or Snakemake.
• Familiarity with fundamentals of nucleic acid sequence alignment and comparison.
• Knowledge and experience of phylogenetic analysis.
• Knowledge of and experience working with clinical data.
• Experience working with CDC staff at multiple organizational levels.
• Interpersonal communication: telephone, email, and business etiquette.
• Strong proofreading skill and attention to detail.
• Strong organizational skills.
• Experience working with CDC staff at multiple organizational levels. Work experience in the scientific field, including physician, epidemiologist, clearance reviewer, or related field (preferably in a public health setting).