Full-Time

Senior Computational Biologist I

Confirmed live in the last 24 hours

Freenome

Freenome

201-500 employees

Develops blood tests for early cancer detection

Compensation Overview

$161.9k - $247k/yr

+ Pre-IPO Equity + Cash Bonuses

Senior

Daly City, CA, USA + 1 more

More locations: Remote in USA

This role can be hybrid based in our Brisbane, California headquarters, or remote.

Category
Computational Biology
Genomics
Biology & Biotech
Required Skills
Python
Git
Machine Learning
Requirements
  • PhD in statistics, computational biology, cancer biology, or related quantitative field, with additional 3+ years postdoc or industry experience
  • A solid foundation in cancer and molecular biology
  • Solid quantitative reasoning and statistical analysis skills
  • Strong computational and programming skills, ideally with Python expertise, and experience working with large datasets
  • A passion for creating robust and reproducible computational analyses; fluency with software version control (Git)
  • Deep understanding of cancer molecular biology
  • Experience with high throughput NGS-based screening
  • Excellent oral and written communication skills to communicate to both scientific and broader audiences
  • Ability to work on a cross-functional team in our highly collaborative environment, working with both computational and experimental scientists
Responsibilities
  • Lead the analysis and interpretation of molecular and clinical data in the context of early cancer detection, serving as a key thought leader on the Computational Science team
  • Suggest research hypotheses and areas for potential computational model and assay improvement; then plan, scope, and execute associated research in partnership with a multidisciplinary team
  • Effectively apply machine learning and statistical modeling tools, or develop novel ones, as appropriate for Freenome’s research questions and product requirements
  • Develop classification models using novel molecular signatures and evaluate feasibility of translating these biomarkers to the product development phase
  • In collaboration with wet lab scientists, rapidly characterize and iterate on experimental methods by providing real-time assessments of assay performance, quality control, and clinical/diagnostic utility
  • Remain at the forefront of molecular techniques in oncology, and collaborate with the larger team to bring forward the next generation of assays for early cancer detection
Desired Qualifications
  • Experience in building bioinformatics pipelines and computational tools to enable reproducible research analysis
  • Experience in developing early cancer detection computational models using novel molecular/immunological signatures
  • Domain expertise in molecular techniques in oncology and immunology for the early detection of disease
  • Experience with immuno-assays technology
  • Experience with proteomics
  • Experience applying modern machine learning methods to analysis of biological systems
  • Experience with blood-based clinical diagnostics

Freenome focuses on improving cancer detection through advanced blood tests. The company uses a multiomics approach, analyzing various biological data types, including genomics and proteomics, to find cancer markers in blood samples. This method allows for non-invasive early detection of cancer, which is crucial for effective treatment. Freenome differentiates itself from competitors by its unique combination of data analysis techniques and its commitment to clinical trials and research collaborations. The company's goal is to enhance cancer diagnostics and make early detection accessible to healthcare providers and patients, ultimately aiming to save lives through timely intervention.

Company Size

201-500

Company Stage

Late Stage VC

Total Funding

$1.1B

Headquarters

San Francisco, California

Founded

2014

Simplify Jobs

Simplify's Take

What believers are saying

  • Recent $254 million funding boosts Freenome's clinical programs and platform capabilities.
  • Partnership with Walgreens enhances clinical trial diversity and robustness.
  • Acquisition of Oncimmune strengthens Freenome's immunodiagnostics and multiomics platform.

What critics are saying

  • Leadership change with new CEO Aaron Elliott may lead to strategic shifts.
  • Layoffs of 100 employees could impact morale and productivity.
  • Dependence on large-scale clinical trials poses risks if results are unfavorable.

What makes Freenome unique

  • Freenome uses a unique multiomics approach for early cancer detection.
  • The company focuses on non-invasive blood tests for proactive disease management.
  • Freenome's platform designs personalized health conditions based on cell-free genome analysis.

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Benefits

Competitive market-based salaries

Annual bonus opportunities

Relocation packages

Medical, dental, & vision coverage

401k

Wellness programs

Equity

PTO

Growth & Insights and Company News

Headcount

6 month growth

0%

1 year growth

0%

2 year growth

4%
PR Newswire
Apr 14th, 2025
Freenome Names Aaron Elliott, Ph.D., As Chief Executive Officer To Lead The Company'S Next Chapter Of Commercial Growth And Product Innovation

Accomplished industry leader brings specialized experience to advance Freenome's screening blood tests for colorectal cancer, lung cancer and additional indications BRISBANE, Calif., April 8, 2025 /PRNewswire/ -- Freenome, a biotechnology company pioneering an early cancer detection platform, today announced the appointment of Aaron Elliott, Ph.D., as its new chief executive officer. With nearly 20 years in the diagnostics industry, Aaron has provided leadership at the intersection of RD, product development and commercialization to drive market traction and expand clinical impact. His experience includes a deep focus on early cancer detection and multiomics that aligns with Freenome's mission to make cancer screening accessible for everyone

SDBN
Apr 24th, 2024
Cancer testing company Freenome to lay off 100 employees

Cancer testing company Freenome to lay off 100 employees.

GlobalData
Apr 14th, 2024
Freenome swings $254m investment

The announcement comes alongside two ongoing clinical trials launched by Freenome, including its prospective PREEMPT CRC study (NCT04369053), a longitudinal real-world data study consisting of under 40,000 participants evaluating the company's blood-based screening test among adults at average risk for CRC.

Freenome
Feb 16th, 2024
Freenome Raises $254 Million in New Funding to Accelerate its Platform for Early Cancer Detection | Freenome

Roche led the financing alongside existing and new investors. The funds will progress clinical programs and expand platform capabilities.

PR Newswire
Dec 12th, 2023
Freenome Initiates Proact Lung Clinical Study For The Early Detection Of Lung Cancer Using Blood Test Developed On Multiomics Platform

– Registrational study targets enrollment of 20,000 individuals at high risk of lung cancer –SOUTH SAN FRANCISCO, Calif., Dec. 12, 2023 /PRNewswire/ -- Freenome, a privately held company developing multiomics blood tests for early cancer detection, today announced the initiation of its PROACT LUNG study and provided an update on its lung cancer research, including the ongoing Vallania study. The study is intended to validate the clinical performance of the Freenome blood test for lung cancer screening. The test combines lung cancer-specific biomarkers with cancer-common markers identified on Freenome's proprietary multiomics platform. This is Freenome's second blood-based test developed on the platform and being evaluated in a prospective clinical study.Early detection of lung cancer, while in its most treatable stage, leads to better clinical outcomes for patients.1,2 Recently, the United States Preventive Services Task Force expanded the recommended ages and smoking history for lung cancer screenings, reaffirming the importance of early detection. In people at high risk for lung cancer, annual screening with a low-dose CT (LDCT) scan is typically recommended as part of the standard of care (SOC)