Full-Time

Computer Systems Analyst

Posted on 12/27/2025

Axle

Axle

201-500 employees

Translational research informatics and data science

Compensation Overview

$95k - $105k/yr

Baltimore, MD, USA

In Person

Category
Biology & Biotech (2)
,
Required Skills
Data Science
Machine Learning
Operating Systems
Data Engineering
Data Analysis
Requirements
  • Support and maintain scientific computer systems including hardware, operating systems, and associated services in a high-performance computing environment.
Responsibilities
  • Inspect Equipment - Weekly.
  • Meet with lab members to present updates - Weekly.
  • Patch and update server software - Monthly.
  • Provide systems analysis and bioinformatics support for large scale sequencing projects.
  • Perform algorithm development and implementation.
  • Perform statistical analysis of experimental data obtained at various time points.
  • Develop and test web applications.
  • Provide technical experience needed to perform analyses, processing and user support of various computer systems using standard statistical procedures and techniques.
  • Provide statistical support to staff, including data analysis and the generation tools for researchers to use.
  • Provide support and consultation in the areas of scientific computation, application-development and computer modeling.
  • Design, develop, document, analyze, create, test and modify computer systems, programs and integrations.
  • Set up and uses various computer systems and software packages.
  • Provide performance tuning, hardware upgrades, and resource optimization across the full range of scientific high-performance computing architecture.
  • Provide software solutions across diverse scientific applications including large and complex multi-component resources.
  • Collaborate with staff to increase the productivity/efficiency of data analysis using high-performance computing.
  • Implement improvements to development activities to speed development of applications, databases, or software tools.
  • Determine needs and provide IT support for computerized systems supporting activities.
  • Work with staff on the evolving infrastructure, data engineering pipeline, and data science stacks.
  • Compiles and manages data and assists with quality control.
  • Develop custom computer applications for collecting and analyzing data, including some that interface with commercial and custom built hardware.
  • Perform troubleshooting, interpretation of results and analysis.
  • Utilize knowledge of data structure, data management and various programming language.
  • Manage data formatting input and output.
  • Perform quality assurance and quality control; troubleshoot issues with image analysis and quality.
  • Analyze results of the data that are collected during experimental studies; perform statistical analysis using statistical analysis software.
  • Drive collection of new data and the refinement of existing data.
  • Produces various reports, graphs and figures for presentation.
  • Prepare data and analysis for presentations and publication.
  • Present results in graphical using appropriate language.
  • Prepare research data for presentation and manuscripts.
  • Interface with the statistical programming team to develop programming standards and assist the team with validation and change control documentation.
  • Enhance efficient and effective presentation of information, content, images and graphics online and through the digital platforms.
  • Trains users in applying systems and analysis methods.
  • Plan, organize and coordinate formal and informal IT related training and orientation of IT initiatives.
  • Support and train users in applying data analysis pipelines and methods for research studies.
  • Conduct educational courses on basic scientific computing, data analysis scripts and pipelines.
  • Consult and collaborate with users to explain new tools and enable them to be adapted to meet specific research needs.
  • Maintains systems software as well as hardware and security configurations.
  • Support and maintain commercial scientific software and freeware relevant to analyses and scientific discovery.
  • Maintain system software, hardware configuration, and security, as well as upgrade of the software as necessary to maintain security.
  • Deploy security measures to maintain integrity of data.
  • Maintains interface software between multiple computer environments to ensure smooth operation and communication.
  • Perform routine audits of tracking database and packages.
  • Collaborate with staff to increase the productivity/efficiency of data analysis using high-performance computing.
  • Develops new programs and systems as needed.
  • Design and maintain data analysis pipelines for research data.
  • Develop customized software to detect and measure specific structures and events of interest for statistical analysis and testing specific hypotheses.
  • Create specialized computer software to effectively and automatically analyze experimental data.
  • Develop dedicated and efficient computer software using state of the art computer science approaches, including modern programming languages and coed libraries, machine learning, cross-platform programming, and high-performance computing.
  • Develop scripts to automate data processing pipelines.
  • Develop and implement new or major revisions to applications, databases, or software tools.
  • Research new technologies, standards and systems to improve existing products and websites.
  • Coordinates data storage and mining.
  • Manage a data storage and backup for scientific computers using available resources.
Desired Qualifications
  • Preferred Master's Degree
  • Field of Study: Genetics
  • Software: BioConductor, Scikit-learn, Javascript, Matplotlib, TensorFlow, RMarkdown, Ggplot2, MongoDB, PyTorch, MATLAB, Nodejs, Oracle, Pandas, Plotly, Python, Scrapy, SQLite, Dplyr, HTML5, Keras, Linux, MySQL, NoSQL, NumPy, SciPy, Shiny, PHP, JavaScript, STATA, Bash, HTML, Java, Perl, SPSS, Unix, C++, Git, SAS
  • Skills: Scientific Data analysis, Algorithm development, Statistical modeling, Database management, Data visualization, Data presentation, Machine learning, Data annotation, Exome analysis, Data cleaning, Data analysis, Data mining, Research, Scientific Computing using GPU, Website Development Maintenance, Imaging, LIMS

Axle Informatics provides specialized informatics solutions for translational research, health informatics, and data science to biomedical research centers and healthcare organizations. Its offerings are customized software and data management platforms that help researchers collect, integrate, analyze, and visualize large research datasets, with end-to-end tools that automate data aggregation and deliver analytics, dashboards, and decision-support features. The company differentiates itself with an integrated, scientifically informed approach that bridges data science with application development, specifically focused on translational research and clinical data work rather than generic software. Axle’s goal is to advance public health by moving biomedical discoveries from the lab to bedside, improving healthcare outcomes.

Company Size

201-500

Company Stage

N/A

Total Funding

N/A

Headquarters

Rockville, Maryland

Founded

2002

Simplify Jobs

Simplify's Take

What believers are saying

  • Axle won $21M NIH NCATS STPS contract for scientific support in 2026.
  • Axle secured 3-year NIAID VRC/NIC task beating one bidder recently.
  • Axle’s ML pipeline boosted NIH funding by 3% averting 20% cuts.

What critics are saying

  • NIH FY2026 cuts slash 15% translational research funding in 3-6 months.
  • Tempus AI captures 25% NIH bioinformatics contracts in 12-18 months.
  • DNAnexus federated platform halts 40% Axle deployments in 6-9 months.

What makes Axle unique

  • Axle deploys fine-tuned LLMs for biomedical NLP and sentiment analysis.
  • Axle provides Healthcare Authentication Solution reducing fraud in privacy-first care.
  • Reid Simon leads AI, Cloud, and Cybersecurity expansions at NIH institutes.

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Benefits

Health Insurance

Dental Insurance

Vision Insurance

Paid Vacation

Paid Holidays

401(k) Company Match

Educational Benefits for Career Growth

Employee Referral Bonus

Flexible Spending Accounts

Company News

W.W. Grainger, Inc.
Jul 25th, 2023
“Octo awarded $64.7M IT Infrastructure Call Order to support NCI’s Cancer research”

Octo, in partnership with Unissant, Axle Informatics, and TRex, has been awarded an IT Infrastructure and Operations Call Order to support the NCI’s OCIO.

GlobeNewswire
Jan 12th, 2023
Digital Pathology Market Worth $1.86 Billion by 2030 -

For instance, in May 2020, Indica Labs (U.S.), a provider of digital pathology solutions, collaborated with information technology consulting companies, Octo (U.S.) and Axle Informatics (U.S.) and the National Institutes of Health (NIH) (U.S.), to develop an online collection of high-resolution histopathology images of tissues from COVID-19 patients using Indica’s HALO Link platform.

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