Full-Time

Staff Software Engineer

Posted on 8/8/2024

Karius

Karius

201-500 employees

Non-invasive diagnostic tests for infections

Compensation Overview

$146.4k - $219.6kAnnually

Senior, Expert

San Carlos, CA, USA + 1 more

More locations: Remote in USA

Redwood City is hybrid; remote option available for the USA.

Category
Backend Engineering
Software Engineering
Required Skills
Kubernetes
Microsoft Azure
JavaScript
NoSQL
Git
Node.js
Nest.js
SQL
Apache Kafka
GraphQL
Docker
TypeScript
AWS
JIRA
Confluence
Development Operations (DevOps)
Google Cloud Platform
Requirements
  • Bachelor's degree in Computer Science or Software Engineering.
  • 10+ years of experience designing, developing, and maintaining backend solutions in a production environment.
  • 5+ years of hands-on experience with various system architectural patterns, such as event-driven microservice using Kafka.
  • 5+ years of hands-on experience with Typescript/javaScript backend stack using frameworks such as Express, Nest.js, and Node.js.
  • Practical examples of complex system data modeling and servicing using REST, GraphQL, no-SQL/SQL databases & ORMs.
  • Experience with DevOps culture using cloud computing in AWS (strongly preferred), Azure, or GCP.
  • A deep understanding of and hands-on experience with software deployment and operation using containerization technologies like Docker and container management like Kubernetes.
  • Experience with development lifecycle management tools like Jira, Confluence, GitHub or similar.
  • Experience in healthcare, life sciences, or other regulated industries.
Responsibilities
  • Design software services that drive the Karius genomics lab workflows and related business processes to generate life-saving diagnostic reports.
  • Follow Domain Driven Design to clearly document the system architecture, service design, and the interfaces.
  • Ensure the software services meet expected quality gates by developing unit and functional tests.
  • Collaborate with cross-functional teams such as Lab Operations, Customer Success, Finance, Product Management, and Quality Engineering, and follow the defined Engineering SDLC to deliver value to the customers and users.
  • Contribute to the engineering organization’s technical efforts such as design and code reviews, technology evaluations, and development of proof of concepts.
  • Provide production operation support for diagnostics software services.
  • Contribute to advancing a culture of a high-performing team by having close collaboration and engagement with the rest of the engineering team in solving challenges as they arise.
  • Research and introduce new technologies that will add value to Karius products.

Karius focuses on medical diagnostics for infectious diseases, offering the Karius Test, a liquid biopsy that detects over 1,000 pathogens from a single blood sample. This non-invasive test is quick and helps clinicians treat vulnerable hospitalized patients by reducing the need for multiple invasive tests that can delay treatment. The Karius Test utilizes advanced genomics and artificial intelligence to identify microbial cell-free DNA (mcfDNA) in the bloodstream, providing insights into the pathogens responsible for infections. Karius differentiates itself from competitors by offering a faster, non-invasive alternative to traditional diagnostic methods, which can save lives and lower healthcare costs. The company's goal is to enhance infectious disease diagnostics through continuous learning and improvement of their machine learning algorithms and genomic databases.

Company Size

201-500

Company Stage

Series C

Total Funding

$311.3M

Headquarters

Redwood City, California

Founded

2014

Simplify Jobs

Simplify's Take

What believers are saying

  • Karius secured $100M to expand its test beyond 400 U.S. hospitals.
  • FDA Breakthrough Device Designation boosts credibility and market potential.
  • Growing demand for non-invasive diagnostics aligns with Karius's offerings.

What critics are saying

  • Competition from AlphaFold 3 could overlap with Karius's genomic insights.
  • Rapid AI advancements by competitors may outpace Karius's technology.
  • Reliance on continuous funding rounds indicates potential financial instability.

What makes Karius unique

  • Karius Test detects over 1,000 pathogens from a single blood sample.
  • The test uses advanced genomics and AI for rapid, non-invasive diagnostics.
  • Karius's proprietary algorithms analyze genomic data in real time.

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Benefits

Remote Work Options

Hybrid Work Options

Growth & Insights and Company News

Headcount

6 month growth

0%

1 year growth

1%

2 year growth

-2%
Business Wire
May 16th, 2024
Karius Test® Receives Fda Breakthrough Device Designation To Aid In The Diagnosis Of Infectious Disease

REDWOOD CITY, Calif.--(BUSINESS WIRE)--Karius®, Inc., a leader in genomic diagnostics for infectious diseases, announced today that the Karius Test® has been granted designation as a Breakthrough Device from The Center for Devices and Radiological Health (CDRH) of the US Food and Drug Administration (FDA), for use in the diagnosis and management of immunocompromised patients with suspected lung infections including lower respiratory infection and pneumonia. “The Karius Test is commercially available nationwide as a laboratory developed test. We are seeking FDA marketing authorization of the Karius Test for lung infections in immunocompromised patients because improved diagnostic tests are urgently needed for these patients,” stated Brad Perkins, M.D., Chief Medical Officer of Karius. “As noted in the American Thoracic Society (ATS) Workshop Report for Immunocompromised Host Pneumonia: Definitions and Diagnostic Criteria,1 lung infections have high morbidity and mortality in immunocompromised patients, which is why advances in technologies like metagenomic sequencing used for the Karius Test are vital in improving the diagnosis and treatment of these patients.”. The Breakthrough Devices Program is a voluntary program for certain medical devices and device-led combination products that provide for more effective treatment or diagnosis of a life-threatening or irreversibly debilitating disease or condition. This program is designed to expedite the development and review of these innovative medical devices

Forbes
May 8th, 2024
Innovationrx: Deepmind Unveils Its New Protein-Folding Ai Model Alphafold 3

InnovationRx is your weekly digest of healthcare news. To get it in your inbox, subscribe here. A protein folding prediction in response to a small molecule generated by AlphaFold 3.Isomorphic LabsToday, Deepmind announced the launch of AlphaFold 3, the next generation of its AI software for structural biology, which has enabled thousands of researchers to predict the complicated chemical interactions involved with proteins. One major difference in the new iteration of the program: instead of just predicting protein folding, it predicts the interactions of other biological molecules as well including DNA, RNA and small molecules. The company published the accuracy of its predictions in the journal Nature.In addition to the new capabilities–which even includes the ability to make predictions based on epigenetic changes to DNA–the company has also launched AlphaFold Server, a web service that enables researchers to generate biochemical models without having to install the system itself from open source code, as was the case with previous iterations. Something else new is that AlphaFold now works with diffusion models – which are popularly known for being used by AI systems that generate images from text prompts – in place of some of its previous structural models.“The response to AlphaFold 2 was more than I could have ever imagined in terms of the kind of creativity and what the research community has done with it,” Deepmind research director John Jumper said at a press briefing

CityBiz
May 3rd, 2024
Karius Secures $100M in Series C

Karius, Inc., a genomic diagnostics company, has raised $100 million in a Series C funding round co-led by Khosla Ventures, 5AM Ventures, and Gilde Healthcare. The funds will be used to expand the reach of the Karius Test®, which detects over 1,000 pathogens from a single blood sample, beyond 400 U.S. hospitals. The company also added three new board members, including Alex Morgan from Khosla Ventures, Joep Muijrers from Gilde Healthcare, and Andrew Booth from 5AM Ventures.

Rama On Healthcare
May 2nd, 2024
Karius Secures $100M to Expand Non-Invasive Pathogen Blood Test

Karius secures $100M to expand non-invasive pathogen blood Test.

Business Wire
May 2nd, 2024
Karius Raises $100M Co-Led By Khosla Ventures, 5Am Ventures And Gilde Healthcare, To Expand Access To Advanced Genomic Diagnostics In Infectious Disease, Addressing Antimicrobial Resistance Crisis

REDWOOD CITY, Calif.--(BUSINESS WIRE)--Karius®, Inc., a world leader in genomic diagnostics for infectious disease, today announced it has secured $100 million in Series C funding. The round was co-led by Khosla Ventures and new investors 5AM Ventures and Gilde Healthcare. Also investing was new investor Seventure Partners, and existing investors Softbank Vision Fund 2, General Catalyst, HBM Healthcare Investments, Blue Water Life Sciences, Innovation Endeavors, Waycross Ventures, and others. This investment will enable Karius to extend its reach beyond the 400 U.S. hospitals currently using the Karius Test®, an infectious disease diagnostic test that utilizes genomic analysis and artificial intelligence to detect over 1,000 pathogens from a single blood sample. The funding enables Karius to address increasing demand from healthcare providers to expand access to the Karius Test beyond the hospital setting

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